Conformations of ribonucleoside uridine in the low temperature Ar matrices

The conformational equilibrium of the ribonucleoside uridine molecules in the low temperature Ar matrices was investigated by the FTIR matrix isolation spectroscopy and quantum-chemical calculations at the DFT and MP2 levels of theory. It was established that conformers with the carbonyl group C2O w...

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Veröffentlicht in:Физика низких температур
Datum:2010
1. Verfasser: Ivanov, A.Yu.
Format: Artikel
Sprache:English
Veröffentlicht: Фізико-технічний інститут низьких температур ім. Б.І. Вєркіна НАН України 2010
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Online Zugang:https://nasplib.isofts.kiev.ua/handle/123456789/117030
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Zitieren:Conformations of ribonucleoside uridine in the low temperature Ar matrices / A.Yu. Ivanov // Физика низких температур. — 2010. — Т. 36, № 5. — С. 571–578. — Бібліогр.: 32 назв. — англ.

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Digital Library of Periodicals of National Academy of Sciences of Ukraine
id nasplib_isofts_kiev_ua-123456789-117030
record_format dspace
spelling Ivanov, A.Yu.
2017-05-19T08:53:41Z
2017-05-19T08:53:41Z
2010
Conformations of ribonucleoside uridine in the low temperature Ar matrices / A.Yu. Ivanov // Физика низких температур. — 2010. — Т. 36, № 5. — С. 571–578. — Бібліогр.: 32 назв. — англ.
0132-6414
PACS: 33.15.–e, 67.80.–s
https://nasplib.isofts.kiev.ua/handle/123456789/117030
The conformational equilibrium of the ribonucleoside uridine molecules in the low temperature Ar matrices was investigated by the FTIR matrix isolation spectroscopy and quantum-chemical calculations at the DFT and MP2 levels of theory. It was established that conformers with the carbonyl group C2O which takes part in the intramolecular hydrogen bonds dominate in the low temperature matrices. Populations of syn- and anticonformers with intramolecular hydrogen bonds O5’H–O2 and O2’–O2, respectively, are equal practically. Unlike 2’-deoxyuridine, the syn-conformers of Ur with C3’-endo structure of the ribose ring (South) have been found in Ar matrices. At the same time the conformations of C2’-endo (North) ribose ring prevail both in antiand syn-conformers.
The present work was carried out due to the financial support of the National Academy of Sciences of Ukraine. The author thanks S.G. Stepanian for helpful discussion and L.F. Belous for his great help in organization and carrying out of calculations on the GRID-cluster of B. Verkin Institute for Low Temperature Physics and Engineering of the National Academy of Sciences of Ukraine.
en
Фізико-технічний інститут низьких температур ім. Б.І. Вєркіна НАН України
Физика низких температур
Nanostructures and Impurity Centers in Cryogenic Environment
Conformations of ribonucleoside uridine in the low temperature Ar matrices
Article
published earlier
institution Digital Library of Periodicals of National Academy of Sciences of Ukraine
collection DSpace DC
title Conformations of ribonucleoside uridine in the low temperature Ar matrices
spellingShingle Conformations of ribonucleoside uridine in the low temperature Ar matrices
Ivanov, A.Yu.
Nanostructures and Impurity Centers in Cryogenic Environment
title_short Conformations of ribonucleoside uridine in the low temperature Ar matrices
title_full Conformations of ribonucleoside uridine in the low temperature Ar matrices
title_fullStr Conformations of ribonucleoside uridine in the low temperature Ar matrices
title_full_unstemmed Conformations of ribonucleoside uridine in the low temperature Ar matrices
title_sort conformations of ribonucleoside uridine in the low temperature ar matrices
author Ivanov, A.Yu.
author_facet Ivanov, A.Yu.
topic Nanostructures and Impurity Centers in Cryogenic Environment
topic_facet Nanostructures and Impurity Centers in Cryogenic Environment
publishDate 2010
language English
container_title Физика низких температур
publisher Фізико-технічний інститут низьких температур ім. Б.І. Вєркіна НАН України
format Article
description The conformational equilibrium of the ribonucleoside uridine molecules in the low temperature Ar matrices was investigated by the FTIR matrix isolation spectroscopy and quantum-chemical calculations at the DFT and MP2 levels of theory. It was established that conformers with the carbonyl group C2O which takes part in the intramolecular hydrogen bonds dominate in the low temperature matrices. Populations of syn- and anticonformers with intramolecular hydrogen bonds O5’H–O2 and O2’–O2, respectively, are equal practically. Unlike 2’-deoxyuridine, the syn-conformers of Ur with C3’-endo structure of the ribose ring (South) have been found in Ar matrices. At the same time the conformations of C2’-endo (North) ribose ring prevail both in antiand syn-conformers.
issn 0132-6414
url https://nasplib.isofts.kiev.ua/handle/123456789/117030
citation_txt Conformations of ribonucleoside uridine in the low temperature Ar matrices / A.Yu. Ivanov // Физика низких температур. — 2010. — Т. 36, № 5. — С. 571–578. — Бібліогр.: 32 назв. — англ.
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