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Effects of frustration on the kinetics of helix formation in alanine polypeptides

The folding kinetics of a seven-residue long alanine polypeptide are investigated using a fully atomic protein model and molecular dynamics simulations. The peptide adopts helical conformations in the native state when simulated in two different implicit solvents: a model with a distance dependen...

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Bibliographic Details
Main Authors: Baumketner, A., Shea, J.-E.
Format: Article
Language:English
Published: Інститут фізики конденсованих систем НАН України 2004
Series:Condensed Matter Physics
Online Access:http://dspace.nbuv.gov.ua/handle/123456789/118965
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